Message boards : Number crunching : rosetta python projects (vbox64)
Previous · 1 · 2 · 3 · 4 · 5 . . . 6 · Next
Author | Message |
---|---|
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
Can a reset of the project may help?? No, doesn't help Still errors, also with aaaf-PPR-SER Please, someone solve this problem, i continue to download useless gb.... |
![]() Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,924,136 RAC: 3,305 ![]() |
Looks like it's been fixed, which of a good job because there's 24k of them in the queue now! |
![]() Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,924,136 RAC: 3,305 ![]() |
The one vbox task that was running when I last checked was only using 30MB and was using a full core. |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
https://boinc.bakerlab.org/rosetta/result.php?resultid=1426192284 aaaf-SAR_pp-PTAMBA_pp-mNMSER_pp-NMBEN3_pp_0_1732372_9_1 Run time 31 min 53 sec CPU time 29 min 46 sec Waiting for VM "boinc_24bec2737e51d8cb" to power on... VBoxManage.exe: error: The VM session was closed before any attempt to power it on VBoxManage.exe: error: Details: code E_FAIL (0x80004005), component SessionMachine, interface ISession 2021-09-17 18:38:23 (9396): VM failed to start. 2021-09-17 18:38:23 (9396): Could not start 2021-09-17 18:38:23 (9396): ERROR: VM failed to start Workunit 1272965350 name aaaf-SAR_pp-PTAMBA_pp-mNMSER_pp-NMBEN3_pp_0_1732372_9 application rosetta python projects created 16 Sep 2021, 17:37:18 UTC minimum quorum 1 initial replication 1 max # of error/total/success tasks 1, 2, 1 errors Too many errors (may have bug) Too many total results https://boinc.bakerlab.org/rosetta/result.php?resultid=1426188359 Waiting for VM "boinc_24bec2737e51d8cb" to power on... VBoxManage.exe: error: The VM session was closed before any attempt to power it on VBoxManage.exe: error: Details: code E_FAIL (0x80004005), component SessionMachine, interface ISession And a few more like that |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
Credit for completed tasks runs between 118 to 265 points Run time is 9,000-20,000 seconds |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
I'm not a lucky man.... <error_code>-119 (md5 checksum failed for file)</error_code> |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
I'm not a lucky man.... Would you please include a link to one of the tasks that is causing this? Do you have any other work from Rosetta? Here is a crazy idea, set the project to 'no new tasks'. Finish all the non python work you have and then click on reset the project button. All I am thinking here is that it will maybe randomly reattach at a better point in the server queue. It is not a real fix to the problem, but it will take you back to a clean state. Also just for the heck of it, be sure that you have the latest VM and extension pack. Again, may or may not help with the problem, but its worth a try. |
Bryn Mawr Send message Joined: 26 Dec 18 Posts: 412 Credit: 12,548,306 RAC: 14,066 ![]() |
I'm not a lucky man.... The server queue currently has 29k python tasks and just 2 Rosetta 4.20 tasks so it’s no go until that changes. |
![]() Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,924,136 RAC: 3,305 ![]() |
And just to add, I believe the vbox tasks will only run under a local account, so they won't run if BOINC was installed to run under the service account. |
![]() Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,924,136 RAC: 3,305 ![]() |
And just to add, I believe the vbox tasks will only run under a local account, so they won't run if BOINC was installed to run under the service account. |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
I'm not a lucky man.... With my BOINC manager acting funny due to cpu core allocations per project I have 866 (4.2) jobs in queue and 109 python tasks. Alot of these will probably be canceled by server (missed start deadline) and sent back into the queue. So someone should have some 4.20 work soon. |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
I'm finding in the client_state files that python does include a md5 checksum, so it is possible that the value written in client_state got corrupted somehow and with a reset, new data would be downloaded and replace the corrupted or missing values. This is based on some information from Einstein group where they also had MD5 errors, but used a work around, which I am trying to see if there is a place in Rosetta's portion of the client_state that would allow for this. And I can't really find anything that matches. So really just a project reset and a coin toss are the only options for this problem. |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
Something different. The task listing page is nuts. It says I have a 121 python tasks, but shows only 8 tasks. |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
Would you please include a link to one of the tasks that is causing this? For sure!! 1426492275 1426492111 1426492670 etc Do you have any other work from Rosetta? No, the 4.20 app queue is empty Here is a crazy idea, set the project to 'no new tasks'. Finish all the non python work you have and then click on reset the project button. I did it yesteday. No difference. Also just for the heck of it, be sure that you have the latest VM and extension pack. Again, may or may not help with the problem, but its worth a try. VirtualBox 6.1.18 with 6.1.18 extension pack. |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
So really just a project reset and a coin toss are the only options for this problem. I'll re-reset the project, update the VirtualBox to the latest version and stop the AVG antivirus to see if the problem will solve. Uh, i found also and old installation of WSL (windows subsystem for linux). I remove it, 'cause i don't know if this creates problem to vdi files (but i think not) |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
And just to add, I believe the vbox tasks will only run under a local account, so they won't run if BOINC was installed to run under the service account. How can i see this? |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
I'll re-reset the project, update the VirtualBox to the latest version and stop the AVG antivirus to see if the problem will solve. Done all (update, remove, reset). Again download error. I give up. 1426813701 |
![]() Send message Joined: 3 Nov 05 Posts: 1832 Credit: 119,924,136 RAC: 3,305 ![]() |
If you open task manager, go to the details tab, and have a look at what account BOINC or the Rosetta tasks are running under. They will either be running under SYSTEM is it's a service install, or under your account username if it's not. Also, if you open BOINC manager and go to Tools > Event Log, you should see something like "VirtualBox version 6.1.12" near the start. |
![]() Send message Joined: 1 Dec 05 Posts: 2030 Credit: 10,086,198 RAC: 11,910 ![]() |
They will either be running under SYSTEM is it's a service install, or under your account username if it's not. There is my username, so it's not SYSTEM Event log: 18/09/2021 14:43:44 | | VirtualBox version: 6.1.26 |
![]() ![]() Send message Joined: 30 May 06 Posts: 5691 Credit: 5,859,226 RAC: 0 |
I'll re-reset the project, update the VirtualBox to the latest version and stop the AVG antivirus to see if the problem will solve. But look here https://boinc.bakerlab.org/rosetta/workunit.php?wuid=1273285416, this task errored out as well with your predecessor. So it is NOT your system all the time. It is the tasks that are buggy. As for WSL and VDI, I will let you look through all this information: https://www.google.com/search?client=firefox-b-d&q=wsl+%2B+vdi+error |
Message boards :
Number crunching :
rosetta python projects (vbox64)
©2025 University of Washington
https://www.bakerlab.org